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1

FROM FOLDING THEORIES TO FOLDING PROTEINS: A Review and Assessment of Simulation Studies of Protein Folding and Unfolding

Shea, Joan-Emma, Brooks III, Charles L

Journal:

Annual Review of Physical Chemistry

Year:

2001

Language:

english

File:

PDF, 917 KB

english, 2001

2

Not Physical Chemistry (in the Eyes of the Journal of Physical Chemistry )

Shea, Joan-Emma

Journal:

Journal of Physical Chemistry B

Year:

2017

Language:

english

File:

PDF, 171 KB

english, 2017

3

First trimester ultrasound screening is effective in reducing postterm labor induction rates: A randomized controlled trial

Kelly A Bennett, Joan M.G Crane, Patrick O'Shea, Joanne Lacelle, Donna Hutchens, Joshua A Copel

Journal:

American Journal of Obstetrics and Gynecology

Year:

2004

Language:

english

File:

PDF, 121 KB

english, 2004

4

114 Altered Expression of Tight Junction-Related Proteins and Increased Intestinal Permeability in a Rat Model of Post-Infectious Gut Dysfunction

Fernandez-Blanco, Joan Antoni, Martinez, Vicente, Shea-Donohue, Terez, Vergara, Patri

Journal:

Gastroenterology

Year:

2013

Language:

english

File:

PDF, 55 KB

english, 2013

5

[IEEE 2020 Intermountain Engineering, Technology and Computing (IETC) - Orem, UT, USA (2020.10.2-2020.10.3)] 2020 Intermountain Engineering, Technology and Computing (IETC) - Design of Common-Mode Feedback for High-Gain Charge Amplifier

Song, Yixin, Rozsa, Jace, Magalhaes, Joan, Smith, Shea, Karlinsey, Benjamin, Kinnison, Whitney, Gustafson, Elaura, Austin, Daniel, Hawkins, Aaron R., Chiang, Shiuh-hua Wood

Year:

2020

File:

PDF, 639 KB

2020

6

Lay responder naloxone access and Good Samaritan law compliance: postcard survey results from 20 Indiana counties

Watson, Dennis P., Ray, Bradley, Robison, Lisa, Huynh, Philip, Sightes, Emily, Walker, La Shea, Brucker, Krista, Duwve, Joan

Journal:

Harm Reduction Journal

Year:

2018

Language:

english

File:

PDF, 523 KB

english, 2018

7

Binding Modes of Thioflavin-T to the Single-Layer β-Sheet of the Peptide Self-Assembly Mimics

Chun Wu, Matthew Biancalana, Shohei Koide, Joan-Emma Shea

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 435 KB

english, 2009

8

V. Meta-Analysis of the Efficacy of Hormone Replacement Therapy in Treating and Preventing Osteoporosis in Postmenopausal Women

Wells, George, Tugwell, Peter, Shea, Beverley, Guyatt, Gordon, Peterson, Joan, Zytaruk, Nicole, Robinson, Vivian, Henry, David, O’Connell, Diane, Cranney, Ann

Journal:

Endocrine Reviews

Year:

2002

Language:

english

File:

PDF, 143 KB

english, 2002

9

Wayfinding the Live 5-2-1-0 Initiative—At the Intersection between Systems Thinking and Community-Based Childhood Obesity Prevention

Amed, Shazhan, Shea, Stephanie, Pinkney, Susan, Wharf Higgins, Joan, Naylor, Patti-Jean

Journal:

International Journal of Environmental Research and Public Health

Year:

2016

Language:

english

File:

PDF, 1.62 MB

english, 2016

10

Effects of confinement and crowding on the thermodynamics and kinetics of folding of a minimalist β-barrel protein

Friedel, Miriam, Sheeler, Daniel J., Shea, Joan-Emma

Journal:

The Journal of Chemical Physics

Year:

2003

Language:

english

File:

PDF, 433 KB

english, 2003

11

The Roper–Logan–Tierney (1996) model of nursing as a tool for professional development in education

Fiona Timmins, Joan O'Shea

Journal:

Nurse Education in Practice

Year:

2004

Language:

english

File:

PDF, 183 KB

english, 2004

12

Do silicone breast implants cause rheumatologic disorders?: A systematic review for a Court-Appointed National Science Panel

Peter Tugwell, George Wells, Joan Peterson, Vivian Welch, Jacqueline Page, Carolyn Davison, Jessie McGowan, David Ramroth, Beverley Shea

Journal:

Arthritis & Rheumatism

Year:

2001

Language:

english

File:

PDF, 74 KB

english, 2001

13

Experiences of Parents Attending a Programme for Families of Adolescent Child Sexual Abuse Perpetrators in Ireland

Duane, Yvonne, Carr, Alan, Cherry, Joan, McGrath, Kieran, O'Shea, Deirdre

Journal:

Child Care in Practice

Year:

2002

Language:

english

File:

PDF, 390 KB

english, 2002

14

Overhauser dynamic nuclear polarization and molecular dynamics simulations using pyrroline and piperidine ring nitroxide radicals

Brandon D. Armstrong, Patricia Soto, Joan-Emma Shea, Songi Han

Journal:

Journal of Magnetic Resonance

Year:

2009

Language:

english

File:

PDF, 350 KB

english, 2009

15

Computational Studies of Protein Aggregation: Methods and Applications

Morriss-Andrews, Alex, Shea, Joan-Emma

Journal:

Annual Review of Physical Chemistry

Year:

2015

Language:

english

File:

PDF, 2.36 MB

english, 2015

16

An adaptive bias - hybrid MD/kMC algorithm for protein folding and aggregation.

Peter, Emanuel Karl Karl, Shea, Joan-Emma

Journal:

Physical Chemistry Chemical Physics

Year:

2017

Language:

english

File:

PDF, 6.17 MB

english, 2017

17

A COMMUNITY EDUCATIONAL PROGRAM FOR THE EMOTIONALLY DISTURBED CHILD

SOL NICHTERN, GEORGE T. DONAHUE, JOAN O'SHEA, MARY MARANS, MARGARET CURTIS, CHARLES BRODY

Journal:

American Journal of Orthopsychiatry

Year:

1964

File:

PDF, 562 KB

1964

18

What Determines the Structure and Stability of KFFE Monomers, Dimers, and Protofibrils?

Bellesia, Giovanni, Shea, Joan-Emma

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 1.13 MB

english, 2009

19

The Linker between the Dimerization and Catalytic Domains of the CheA Histidine Kinase Propagates Changes in Structure and Dynamics That Are Important for Enzymatic Activity

Wang, Xiqing, Vallurupalli, Pramodh, Vu, Anh, Lee, Kwangwoon, Sun, Sheng, Bai, Wen-Ju, Wu, Chun, Zhou, Hongjun, Shea, Joan-Emma, Kay, Lewis E., Dahlquist, Frederick W.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.52 MB

english, 2014

20

Coarse-Grained Modeling of Simple Molecules at Different Resolutions in the Absence of Good Sampling

Larini, Luca, Shea, Joan-Emma

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 1.41 MB

english, 2012

21

Editorial for January 2015 for JPC A/B/C

McCoy, Anne B., Shea, Joan-Emma, Murphy, Catherine J., Schatz, George C.

Journal:

Journal of Physical Chemistry A

Year:

2015

Language:

english

File:

PDF, 162 KB

english, 2015

22

The JPC Periodic Table

Schatz, George C., McCoy, Anne B., Shea, Joan-Emma, Murphy, Catherine J., Scholes, Gregory, Batista, Victor, Bhattacharyya, Kankan, Bisquert, Juan, Crawford, Daniel, Cuk, Tanja, Dickson, Robert, Fairb

Journal:

The Journal of Physical Chemistry C

Year:

2019

Language:

english

File:

PDF, 1004 KB

english, 2019

23

Effect of Genotype and Genotype Ã Nitrogen Rate Interactions on Color in Juice and Raw Sugar from Sugarcane

Jackson, Phillip A., O'Shea, Michael G., Rattey, Allan R., Bonnett, Graham D., Lindeman, Patricia F., Cox, Mike C., Vickers, Joan E., Morgan, Terry

Journal:

Year:

2006

File:

PDF, 168 KB

2006

24

Kinetic pathways to peptide aggregation on surfaces: The effects of β-sheet propensity and surface attraction

Morriss-Andrews, Alex, Shea, Joan-Emma

Journal:

The Journal of Chemical Physics

Year:

2012

Language:

english

File:

PDF, 2.59 MB

english, 2012

25

Simulations Pave the Way for Exploring New Frontiers in the Biological Sciences

Shea, Joan-Emma

Journal:

The Journal of Physical Chemistry Letters

Year:

2014

Language:

english

File:

PDF, 153 KB

english, 2014

26

Coarse-Grained Simulations of Peptide Aggregation on Surfaces

Morriss-Andrews, Alex, Shea, Joan-Emma

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 45 KB

english, 2014

27

Oligomers of the Prion Protein Fragment 106−126 Are Likely Assembled from β-Hairpins in Solution, and Methionine Oxidation Inhibits Assembly without Altering the Peptide’s Monomeric Conformation

Grabenauer, Megan, Wu, Chun, Soto, Patricia, Shea, Joan-Emma, Bowers, Michael T.

Journal:

Journal of the American Chemical Society

Year:

2010

Language:

english

File:

PDF, 991 KB

english, 2010

28

On the Origins of the Weak Folding Cooperativity of a Designed ββα Ultrafast Protein FSD-1

Wu, Chun, Shea, Joan-Emma, Muñoz, Victor

Journal:

PLoS Computational Biology

Year:

2010

Language:

english

File:

PDF, 1.07 MB

english, 2010

29

Communication: An existence test for dividing surfaces without recrossing

Mullen, Ryan Gotchy, Shea, Joan-Emma, Peters, Baron

Journal:

The Journal of Chemical Physics

Year:

2014

Language:

english

File:

PDF, 739 KB

english, 2014

30

The Thermodynamics of Folding of a β Hairpin Peptide Probed Through Replica Exchange Molecular Dynamics Simulations

Andrij Baumketner, Joan-Emma Shea

Journal:

Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)

Year:

2006

Language:

english

File:

PDF, 505 KB

english, 2006

31

Structure of the 21–30 fragment of amyloid β-protein

Andrij Baumketner, Summer L. Bernstein, Thomas Wyttenbach, Noel D. Lazo, David B. Teplow, Michael T. Bowers, Joan-Emma Shea

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 499 KB

english, 2006

32

A Coarse-Grained Model for Peptide Aggregation on a Membrane Surface

Morriss-Andrews, Alex, Brown, Frank L. H., Shea, Joan-Emma

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 4.64 MB

english, 2014

33

A New Editor-in-Chief for The Journal of Physical Chemistry

Shea, Joan-Emma

Journal:

Journal of Physical Chemistry A

Year:

2020

File:

PDF, 204 KB

2020

34

Latent Models of Molecular Dynamics Data: Automatic Order Parameter Generation for Peptide Fibrillization

Charest, Nathaniel, Tro, Michael, Bowers, Michael T., Shea, Joan-Emma

Journal:

Journal of Physical Chemistry B

Year:

2020

File:

PDF, 1.35 MB

2020

35

The Amyloid Formation Mechanism in Human IAPP: Dimers Have β-Strand Monomer−Monomer Interfaces

Dupuis, Nicholas F., Wu, Chun, Shea, Joan-Emma, Bowers, Michael T.

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 2.38 MB

english, 2011

36

Mechanism of C-Terminal Fragments of Amyloid β-Protein as Aβ Inhibitors: Do C-Terminal Interactions Play a Key Role in Their Inhibitory Activity?

Zheng, Xueyun, Wu, Chun, Liu, Deyu, Li, Huiyuan, Bitan, Gal, Shea, Joan-Emma, Bowers, Michael T.

Journal:

Journal of Physical Chemistry B

Year:

2015

Language:

english

File:

PDF, 2.73 MB

english, 2015

37

Reducing IAPP Aggregation with Mitochondrial Humanin Peptides; Results from Simulations and Experiments

Levine, Zachary A., Okada, Alan, Teranishi, Kazuki, Langen, Ralf, Shea, Joan-Emma

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 39 KB

english, 2016

38

Association of Post-Renal Transplant Erythrocytosis and Microalbuminuna: Response to Angiotensin-Converting Enzyme Inhibition

Mulhern, Jeffrey G., Lipkowitz, George S., Braden, Gregory L., Madden, Robert L., O&rsquo, Shea, Michael H., Harvikhuck, Helen, Guamera, Joan M., Germain, Michael J.

Journal:

American Journal of Nephrology

Year:

1995

File:

PDF, 1.05 MB

1995

39

Editorial for January 2019 for JPC A/B/C

McCoy, Anne B., Shea, Joan-Emma, Murphy, Catherine J., Schatz, George C.

Journal:

Journal of Physical Chemistry A

Year:

2019

Language:

english

File:

PDF, 316 KB

english, 2019

40

The Classifying Autoencoder: Gaining Insight to Amyloid Assembly of Peptides and Proteins

Tro, Michael, Charest, Nathaniel, Taitz, Zachary, Shea, Joan-Emma, Bowers, Michael T.

Journal:

Journal of Physical Chemistry B

Year:

2019

Language:

english

File:

PDF, 1.09 MB

english, 2019

41

Simulations of Protein Aggregation in the Cellular Milieu

Shea, Joan-Emma

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 41 KB

english, 2010

42

Role of β-Hairpin Formation in Aggregation: The Self-Assembly of the Amyloid-β(25–35) Peptide

Larini, Luca, Shea, Joan-Emma

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 583 KB

english, 2012

43

Reaction coordinates, one-dimensional Smoluchowski equations, and a test for dynamical self-consistency

Peters, Baron, Bolhuis, Peter G., Mullen, Ryan G., Shea, Joan-Emma

Journal:

The Journal of Chemical Physics

Year:

2013

Language:

english

File:

PDF, 1.65 MB

english, 2013

44

Editorial for January 2016 for JPC A/B/C

McCoy, Anne B., Shea, Joan-Emma, Murphy, Catherine J., Schatz, George C.

Journal:

Journal of Physical Chemistry A

Year:

2016

Language:

english

File:

PDF, 160 KB

english, 2016

45

Simulations of disordered proteins and systems with conformational heterogeneity

Levine, Zachary A, Shea, Joan-Emma

Journal:

Current Opinion in Structural Biology

Year:

2017

Language:

english

File:

PDF, 878 KB

english, 2017

46

Virtual Issue in Honor of the 150th Birthday of Marie Curie: Highlighting Female Physical Chemists

Schatz, George C., McCoy, Anne B., Shea, Joan-Emma, Murphy, Catherine J., Scholes, Gregory D.

Journal:

The Journal of Physical Chemistry Letters

Year:

2017

Language:

english

File:

PDF, 325 KB

english, 2017

47

New Sections for JPC A / B / C

McCoy, Anne B., Shea, Joan-Emma, Murphy, Catherine J., Schatz, George C.

Journal:

The Journal of Physical Chemistry C

Year:

2018

Language:

english

File:

PDF, 280 KB

english, 2018

48

Dehydration entropy drives liquid-liquid phase separation by molecular crowding

Park, Sohee, Barnes, Ryan, Lin, Yanxian, Jeon, Byoung-jin, Najafi, Saeed, Delaney, Kris T., Fredrickson, Glenn H., Shea, Joan-Emma, Hwang, Dong Soo, Han, Songi

Journal:

Communications Chemistry

Year:

2020

File:

PDF, 3.37 MB

2020

49

Computational and Experimental Analyses Reveal the Essential Roles of Interdomain Linkers in the Biological Function of Chemotaxis Histidine Kinase CheA

Wang, Xiqing, Wu, Chun, Vu, Anh, Shea, Joan-Emma, Dahlquist, Frederick W.

Journal:

Journal of the American Chemical Society

Year:

2012

Language:

english

File:

PDF, 1.03 MB

english, 2012

50

The Influence of Different Treatments of Electrostatic Interactions on the Thermodynamics of Folding of Peptides †

Baumketner, Andrij, Shea, Joan-Emma

Journal:

Journal of Physical Chemistry B

Year:

2005

Language:

english

File:

PDF, 353 KB

english, 2005

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